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Prof. Dr. ir. Marjan De Mey |
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E-mail: Marjan.DeMey@UGent.be | ||
Tel.: +32 9 264 60 28 | ||
BIOGRAPHY | |
Associate Professor - Metabolic Engineering of
Microorganisms Centre of Expertise – Industrial Biotechnology and Biocatalysis Ghent University, Ghent, Belgium |
2011-present |
Visiting Scientist Laboratory of Metabolic Engineering and Bioinformatics Massachusetts Institute of Technology, Cambridge, USA |
2010-2011 |
Postdoctoral researcher Centre of Expertise – Industrial Biotechnology and Biocatalysis Ghent University, Ghent, Belgium |
2008-2011 |
Postdoctoral researcher Department of Biotechnology, Delft University of Technology Delft, The Netherlands |
2007-2008 |
PhD. Applied Biological Sciences – Cell and Gene
Biotechnology Ghent University, Ghent, Belgium ‘Metabolic Modeling and Engineering of Escherichia coli to minimize acetate formation in recombinant DNA-fermentations’ |
2007 |
MSc. Bio-engineer Cell and Gene Biotechnology Ghent University, Ghent, Belgium ‘Construction en metabolic characterization of aceA- and aceB-mutants of Escherichia coli’ |
2002 |
RESEARCH INTERESTS | |
Metabolic Engineering, Synthetic Biology and System
Biology Targeted and combinatorial genetic engineering, fermentation technology, analytical techniques and mathematical modeling are used to redesign microorganisms to better understand their operation and to make good use of them for production of bio-based materials from renewable resources. |
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Balancing pathways, Fine-tuning of gene expression The introduction of new genes from e.g. plants into microorganisms enhances their capabilities, but also requires special understanding of measures to be taken to preserve the viability of these microorganisms. Especially in the case of multi-gene, branched and/or poorly understood pathways, transferring such pathways into a heterologous production host often leads to flux imbalances as they typically lack the complex regulatory mechanisms that are vital for efficient operation of these complex pathways. |
TEACHING ACTIVITIES |
Metabolic Engineering and Modeling of Microorganisms in MSc. Bioscience Engineering, Ghent University, Ghent, Belgium. |
International Summer Course – Biotechnology for a Sustainable
Economy Ghent University, Ghent, Belgium. |
Supervision and guidance of BSc. and MSc. students and of PhD.
candidates |
KEY PUBLICATIONS |
De Mey M., Ajikumar P.K., Yadav V.G., Lim C.G. and Stephanopoulos
G.(2011). Metabolic engineering of terpenoid pathways: An intricate
balancing act. Metabolic Engineering, accepted. |
De Mey M., Taymaz-Nikerel H., Baert G., Waegeman H., Maertens J.,
Heijnen J.J. and van Gulik W.M. (2010). Catching prompt metabolite
dynamics of E. coli with the BioScope at oxygen rich conditions.
Metabolic Engineering, 12:477-487. |
De Mey, M., Maertens, J., Boogmans, S., Soetaert, W.K., Vandamme,
E.J., Cunin, R. and Foulquié-Moreno, M.R. (2010). Promoter knock-in: a
novel rational method for the fine tuning of genes. BMC Biotechnology,
10:26. |
Taymaz-Nikerel H., De Mey M., Ras C., ten Pierick A., Seifar R.M.,
van Dam J.C., Heijnen J.J. and van Gulik W.M. (2009). Development and
application of a differential method for reliable metabolome analysis in
Escherichia coli. Analytical Biochemistry, 386, 9-19. |
De Mey, M., Maertens, J., Lequeux, G.J., Soetaert, W.K. and Vandamme, E.J. (2007). Construction and model-based analysis of a promoter library for E. coli: an indispensable tool for metabolic engineering. BMC Biotechnology, 7, 34. |